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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815784.1_cds_XP_016498491.1_12514
CDS Infomation

[gene=LOC107817215] [db_xref=GeneID:107817215] [protein=3beta-hydroxysteroid-dehydrogenase/decarboxylase-like] [protein_id=XP_016498491.1] [location=join(45875..46109,47440..47529,47734..47867,47958..48128,48338..48463,49970..50049,53121..53319,53824..53929,55039..55213,55699..55855,56450..56516,56709..56854)] [gbkey=CDS]
Sequence

ATGGGTGAAGGAGAAGAGAGATGGTGTGTGGTGACCGGAGGGAGAGGTTTTGCTGCTCGC
CATTTGGTGGAAATGCTGATCCGTTACGAAATGTTTCACGTCCGCATTGCGGATTTGGGT
CCGGACATTAAGCTGGAGCCTGACGAGGAGGAAGGCACTGTCGGTAAAGCTCTGCGATCA
GGCCGTGCTCACTATGTATCCATGGATCTTCGTGACAAGTCCCAAGTTCTTAAAGCGTGT
GAAGGAGCAGAAGTGGTATTCCACATGGCTGCGCCAGATTCATCGATCAACAACCACCAG
CTTCATCACTCTGTTAATGTGCTAGGAACCAAGAATATCATTGATGCTTGTGTTGAGCTA
AAAGTGAAGAGACTTATTTATACCAGCTCCCCCAGTGTTGTGTTTGATGGAGTTCATGGT
ATTCTGAACGGGGATGAATCGCTACCATATCCTGCTAAGCATAACGATTCCTATTCTGCA
ACTAAAGCTGAAGGAGAGGCACTAGTTATCAAGTCAAATGATACTAAAGGGCTCCTGACC
TGCTGCATTAGACCTAGCAGTATCTTTGGCCCTGGCGACAGGTTGTTGGTTCCATCACTG
GTTGCAGCAGCAAGGGCAGGAAAATCTAAGTTCATAATTGGTGATGGCAACAACATGTAT
GATTTCACTTACGTAGAAAACGTTGCACATGCTCATGTATGTGCTGAACGAGCTCTCGCA
TCAGGGGGTGCAGTAGCAGAGAAAGCTGCTGGGCAGGCATATTTTATCACAAACATGGAG
CCCATAAAGTTCTGGGAGTTCGTCTCACTTATTCTTGAAGGTCTTGGCTACGAAAGGCCA
AGCATTAAAATTCCTGCTTCTGTTATGATGCCAATTGCACATTTCGTGGAGTTGGCTTAT
AAGCTGTTGGCCGCATATGGAATGAAGGTCCCACAGTTGACTCCGTCAAGAATCAGGCTC
CTATCTCGTAGTAGAACATTTAGTTGTTCAAAAGCAAATGATCGCCTGGGCTACACACCA
ATTGTCCCACTTCAGGAGGGCCTAAGGAGGACAATTGAATCGTATCCGCACTTGAGAGCC
GAAAAGCAGCCAGAAAAAGAAGGCCCTTCTAAAGCTTCTCTATTTCTCGGAAGTGGGAGA
GTGGCTGACACACTTCTTTGGAAGGATAAGAAACAGACACTAACAGCAGCATTAGTTCTG
GCCGCAATTTATTTCAATTTCGTAGCTTCTGGTTTCACCGTTGTAACTTCTATATCAAGG
ATTCTGTTGGTGGCATCAATTTTCTTGTTCATCCACGGGAGACTGCCTCAGAAAATAATG
GGCTATAAAATTGACAAAGTTCCCGGATCATGCTTCCATGTATCGGCAGAGACATCACGC
CAAGTTGCTCTGTCAGCAGCCTCGGAGTGGAATTCTGCAGTAAAGGGTTTAAAGTCTCTT
TGTAGAGGGACTGATTGCATGTTCTTCCTTAAGGTGGTTCTCTCTCTACTGATTCTAAGT
ATCCTTGGAACCATTTCTCTGCGGAGTCTGTTTGTCATTGGAATCCCAGCTGCCTTTACT
TTATTTTTCATATATGAGAAAAAAGAGGAAGAAATAGATCATCTACTTCATGAGATTATC
TCATTTACATGGAAATTGAAGTCTGATATTTCTAGGAGAATTTTCAGCTCCGCAAAAGAC
CGATAA

Peptide Sequence

PEP ID

XP_016498491.1
PEP Infomation

PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase-like [Nicotiana tabacum]
Sequence

MGEGEERWCVVTGGRGFAARHLVEMLIRYEMFHVRIADLGPDIKLEPDEEEGTVGKALRS
GRAHYVSMDLRDKSQVLKACEGAEVVFHMAAPDSSINNHQLHHSVNVLGTKNIIDACVEL
KVKRLIYTSSPSVVFDGVHGILNGDESLPYPAKHNDSYSATKAEGEALVIKSNDTKGLLT
CCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIGDGNNMYDFTYVENVAHAHVCAERALA
SGGAVAEKAAGQAYFITNMEPIKFWEFVSLILEGLGYERPSIKIPASVMMPIAHFVELAY
KLLAAYGMKVPQLTPSRIRLLSRSRTFSCSKANDRLGYTPIVPLQEGLRRTIESYPHLRA
EKQPEKEGPSKASLFLGSGRVADTLLWKDKKQTLTAALVLAAIYFNFVASGFTVVTSISR
ILLVASIFLFIHGRLPQKIMGYKIDKVPGSCFHVSAETSRQVALSAASEWNSAVKGLKSL
CRGTDCMFFLKVVLSLLILSILGTISLRSLFVIGIPAAFTLFFIYEKKEEEIDHLLHEII
SFTWKLKSDISRRIFSSAKDR

Transcript Sequence

Gene sequence data has not been registered.